PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopim01g108080.0.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 415aa    MW: 45028.3 Da    PI: 10.2455
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopim01g108080.0.1genomeCSHLView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414e-13336391559
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkevakl 59 
                         +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ +e ++k+  +l
  Sopim01g108080.0.1 336 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELRKKqAEIIEKQKNQL 391
                         689**************************************976134445555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-11332393IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841334383IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-12336386No hitNo description
SuperFamilySSF579592.81E-9336383No hitNo description
PfamPF001705.0E-11336391IPR004827Basic-leucine zipper domain
PROSITE patternPS000360339354IPR004827Basic-leucine zipper domain
CDDcd147072.83E-22341390No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MGSYMNFKNI TDKPQAESNG GKSVGNGDIP LARQSSIYSL TFDELQTTFS GLGKDFGSIN  60
MEELLKSIWT AEESQAATSS TGGGEDGIAP VGNLQRQGSL TLPRTLSQKT VDEVWRNFQK  120
ETTVCTPDGS ETGKSNFGQR QSTLGEMTLE EFLVKAGVVR EDMQSTSNSS GITFNNGLSQ  180
QNNNNGFNIA FQQPTQNNGL LINQIAANNM LNVVGATASQ QQQPQQQQPL FPKQTTVAFA  240
SPMQLSNNGH LASPRTRAPA VGMSSPSVNA SMAQGGVMGK TGFHNGVSPA KVGSPGNDFI  300
ARSNVDTSSL SPSPYAFSEG GRGRRSGSSL EKVVERRRRR MIKNRESAAR SRARKQAYTL  360
ELEAEVAKLK EINEELRKKQ AEIIEKQKNQ LTDKRNMTCG YKLRCLRRTL TGPW*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755130.0HG975513.1 Solanum lycopersicum chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004230778.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
SwissprotQ9M7Q41e-100AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLK4B3240.0K4B324_SOLLC; Uncharacterized protein
STRINGSolyc01g108080.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.24e-81abscisic acid responsive elements-binding factor 3